- Boothby L, Webb E, Goodlett D, Brown K, Odinet J.Medication administration by inpatient pharmacists: Innovative interdisciplinary care teams. Am J Health Syst Pharm. 2024. PMID: 39656963
- Pawlicka K, Henek T, Uhrik L, Hernychova L, Padariya M, Faktor J, Makowiec S, Vojtesek B, Goodlett D, Hupp T, Kalathiya U.Misincorporations of amino acids in p53 in human cells at artificially constructed termination codons in the presence of the aminoglycoside Gentamicin. Front Genet. 2024. PMID: 39563734
- Al Shboul S, Singh A, Kobetic R, Goodlett DR, Brennan PM, Hupp T, Dapic I.Mass Spectrometry Advances in Analysis of Glioblastoma. Mass Spectrom Rev. 2024. PMID: 39529217
- Bush JR, Iwuamadi I, Han J, Schibli DJ, Goodlett DR, Deehan EC.Resistant Potato Starch Supplementation Reduces Serum Free Fatty Acid Levels and Influences Bile Acid Metabolism. Metabolites. 2024. PMID: 39452917
- Nartey LK, Mikhael A, Pětrošová H, Yuen V, Kibsey P, Pekcan M, Ernst RK, Chen MX, Goodlett DR.A lipidomics-based method to eliminate negative urine culture in general population. J Clin Microbiol. 2024. PMID: 39283074
- Yang H, O'Keefe I, Smith RD, Sumner KP, Sherman ME, Goodlett DR, Sweet CR, Ernst RK.A Multimodal System for Lipid A Structural Analysis from a Single Colony. Anal Chem. 2024. PMID: 39149983
- Faktor J, Henek T, Hernychova L, Singh A, Vojtesek B, Polom J, Bhatia R, Polom K, Cuschieri K, Cruickshank M, Gurumurthy M, Goodlett DR, Al Shboul S, Samal SK, Hupp T, Kalampokas E, Kote S.Metaproteomic analysis from cervical biopsies and cytologies identifies proteinaceous biomarkers representing both human and microbial species. Talanta. 2024. PMID: 38968660
- Mikhael A, Pětrošová H, Smith D, Ernst RK, Goodlett DR.Lipid A double bond position determination using ozone and laser-induced dissociation. Rapid Commun Mass Spectrom. 2024. PMID: 38887144
- Richard VR, Mitsa G, Eshghi A, Chaplygina D, Mohammed Y, Goodlett DR, Zahedi RP, Thevis M, Borchers CH.Establishing Personalized Blood Protein Reference Ranges Using Noninvasive Microsampling and Targeted Proteomics: Implications for Antidoping Strategies. J Proteome Res. 2024. PMID: 38655860
- Aguilar EN, Sagar S, Murray BR, Rajesh C, Lei EK, Michaud SA, Goodlett DR, Caffrey TC, Grandgenett PM, Swanson B, Brooks TM, Black AR, van Faassen H, Hussack G, Henry KA, Hollingsworth MA, Brooks CL, Radhakrishnan P.Structural Basis for Multivalent MUC16 Recognition and Robust Anti-Pancreatic Cancer Activity of Humanized Antibody AR9.6. Mol Cancer Ther. 2024. PMID: 38394685
- Duncan KD, Pětrošová H, Lum JJ, Goodlett DR.Mass spectrometry imaging methods for visualizing tumor heterogeneity. Curr Opin Biotechnol. 2024. PMID: 38310648
- Hofstaedter CE, Chandler CE, Met CM, Gillespie JJ, Harro JM, Goodlett DR, Rasko DA, Ernst RK.Divergent Pseudomonas aeruginosa LpxO enzymes perform site-specific lipid A 2-hydroxylation. mBio. 2024. PMID: 38131669
- Mohammed Y, Tran K, Carlsten C, Ryerson C, Wong A, Lee T, Cheng MP, Vinh DC, Lee TC, Winston BW, Sweet D, Boyd JH, Walley KR, Haljan G, McGeer A, Lamontagne F, Fowler R, Maslove D, Singer J, Patrick DM, Marshall JC, Murthy S, Jain F, Borchers CH, Goodlett DR, Levin A, Russell JA.Proteomic Evolution from Acute to Post-COVID-19 Conditions. J Proteome Res. 2024. PMID: 38048423
- Mikhael A, Hardie D, Smith D, Pětrošová H, Ernst RK, Goodlett DR.Structural Elucidation of Intact Rough-type Lipopolysaccharides Using Field Asymmetric Ion Mobility Spectrometry and Kendrick Mass Defect Plots. Anal Chem. 2023. PMID: 37943784
- Houston S, Gomez A, Geppert A, Eshghi A, Smith DS, Waugh S, Hardie DB, Goodlett DR, Cameron CE.Deep proteome coverage advances knowledge of Treponema pallidum protein expression profiles during infection. Sci Rep. 2023. PMID: 37880309
- Haq S, Oyler BL, Williams E, Khan MM, Goodlett DR, Bachvaroff T, Place AR.Investigating A Multi-Domain Polyketide Synthase in Amphidinium carterae. Mar Drugs. 2023. PMID: 37623706
- MacPherson S, Duncan KD, Goodlett DR, Lum JJ.Strategies for uncovering stable isotope tracing patterns between cell populations. Curr Opin Biotechnol. 2023. PMID: 37619527
- Mikhael A, Hardie D, Smith D, Pětrošová H, Ernst RK, Goodlett DR.Structural Elucidation of Intact Rough-Type Lipopolysaccharides using Field Asymmetric Ion Mobility Spectrometry and Kendrick Mass Defect Plots. bioRxiv. 2023. PMID: 37461651
- Pětrošová H, Mikhael A, Culos S, Giraud-Gatineau A, Gomez AM, Sherman ME, Ernst RK, Cameron CE, Picardeau M, Goodlett DR.Lipid A structural diversity among members of the genus Leptospira. Front Microbiol. 2023. PMID: 37303810
- Yang H, Sherman ME, Koo CJ, Treaster LM, Smith JP, Gallaher SG, Goodlett DR, Sweet CR, Ernst RK.Structure Determination of Lipid A with Multiple Glycosylation Sites by Tandem MS of Lithium-Adducted Negative Ions. J Am Soc Mass Spectrom. 2023. PMID: 37184080
- Eshghi A, Xie X, Hardie D, Chen MX, Izaguirre F, Newman R, Zhu Y, Kelly RT, Goodlett DR.Sample Preparation Methods for Targeted Single-Cell Proteomics. J Proteome Res. 2023. PMID: 37093777
- Bedran G, Gasser HC, Weke K, Wang T, Bedran D, Laird A, Battail C, Zanzotto FM, Pesquita C, Axelson H, Rajan A, Harrison DJ, Palkowski A, Pawlik M, Parys M, O'Neill JR, Brennan PM, Symeonides SN, Goodlett DR, Litchfield K, Fahraeus R, Hupp TR, Kote S, Alfaro JA.The Immunopeptidome from a Genomic Perspective: Establishing the Noncanonical Landscape of MHC Class I-Associated Peptides. Cancer Immunol Res. 2023. PMID: 36961404
- Mohammed Y, Goodlett D, Borchers CH.Bioinformatics Tools and Knowledgebases to Assist Generating Targeted Assays for Plasma Proteomics. Methods Mol Biol. 2023. PMID: 36781806
- Mohammed Y, Goodlett D, Borchers CH.Absolute Quantitative Targeted Proteomics Assays for Plasma Proteins. Methods Mol Biol. 2023. PMID: 36781801
- Prakash R, Goodlett DW, Varghese S, Andrys J, Gbadamosi FA, Arriaza RH, Patel M, Tiwari PB, Borowski T, Chruszcz M, Shimizu LS, Upadhyay G.Development of fluorophore labeled or biotinylated anticancer small molecule NSC243928. Bioorg Med Chem. 2023. PMID: 36680947
- Välikangas T, Suomi T, Chandler CE, Scott AJ, Tran BQ, Ernst RK, Goodlett DR, Elo LL.Benchmarking tools for detecting longitudinal differential expression in proteomics data allows establishing a robust reproducibility optimization regression approach. Nat Commun. 2022. PMID: 36550114
- Sherman ME, Smith RD, Gardner FM, Goodlett DR, Ernst RK.A Sensitive GC-MS Method for Quantitation of Lipid A Backbone Components and Terminal Phosphate Modifications. J Am Soc Mass Spectrom. 2022. PMID: 36326685
- Yang H, Smith RD, Sumner KP, Goodlett DR, Johnson JK, Ernst RK.A Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Direct-from-Urine-Specimen Diagnostic for Gram-Negative Pathogens. Microbiol Spectr. 2022. PMID: 36255333
- Zik JJ, Yoon SH, Guan Z, Stankeviciute Skidmore G, Gudoor RR, Davies KM, Deutschbauer AM, Goodlett DR, Klein EA, Ryan KR.Caulobacter lipid A is conditionally dispensable in the absence of fur and in the presence of anionic sphingolipids. Cell Rep. 2022. PMID: 35649364
- Rocheleau GLY, Lee T, Mohammed Y, Goodlett D, Burns K, Cheng MP, Tran K, Sweet D, Marshall J, Slutsky AS, Murthy S, Singer J, Patrick DM, Du B, Peng Z, Lee TC, Boyd JH, Walley KR, Lamontagne F, Fowler R, Winston BW, Haljan G, Vinh DC, McGeer A, Maslove D, Patrigeon SP, Mann P, Donohoe K, Hernandez G, Russell JA.Renin-Angiotensin System Pathway Therapeutics Associated With Improved Outcomes in Males Hospitalized With COVID-19. Crit Care Med. 2022. PMID: 35607951
- Yang H, Smith RD, Chandler CE, Johnson JK, Jackson SN, Woods AS, Scott AJ, Goodlett DR, Ernst RK.Lipid A Structural Determination from a Single Colony. Anal Chem. 2022. PMID: 35576511
- Weke K, Kote S, Faktor J, Al Shboul S, Uwugiaren N, Brennan PM, Goodlett DR, Hupp TR, Dapic I.DIA-MS proteome analysis of formalin-fixed paraffin-embedded glioblastoma tissues. Anal Chim Acta. 2022. PMID: 35397901
- Doerfler AM, Han J, Jarrett KE, Tang L, Jain A, Saltzman A, De Giorgi M, Chuecos M, Hurley AE, Li A, Morand P, Ayala C, Goodlett DR, Malovannaya A, Martin JF, de Aguiar Vallim TQ, Shroyer N, Lagor WR.Intestinal Deletion of 3-Hydroxy-3-Methylglutaryl-Coenzyme A Reductase Promotes Expansion of the Resident Stem Cell Compartment. Arterioscler Thromb Vasc Biol. 2022. PMID: 35172604
- Dapic I, Uwugiaren N, Kers J, Mohammed Y, Goodlett DR, Corthals G.Evaluation of Fast and Sensitive Proteome Profiling of FF and FFPE Kidney Patient Tissues. Molecules. 2022. PMID: 35164409
- Mohammed Y, Goodlett DR, Cheng MP, Vinh DC, Lee TC, Mcgeer A, Sweet D, Tran K, Lee T, Murthy S, Boyd JH, Singer J, Walley KR, Patrick DM, Quan C, Ismail S, Amar L, Pal A, Bassawon R, Fesdekjian L, Gou K, Lamontagne F, Marshall J, Haljan G, Fowler R, Winston BW, Russell JA.Longitudinal Plasma Proteomics Analysis Reveals Novel Candidate Biomarkers in Acute COVID-19. J Proteome Res. 2022. PMID: 35143212
- Smith RD, McElheny CL, Izac JR, Gardner FM, Chandler CE, Goodlett DR, Doi Y, Johnson JK, Ernst RK.A Novel Lipid-Based MALDI-TOF Assay for the Rapid Detection of Colistin-Resistant Enterobacter Species. Microbiol Spectr. 2022. PMID: 35107363
- Mesa-Perez M, Hamilton PT, Miranda A, Brodie N, O'Sullivan C, Christie J, Ryan BC, Chow RL, Goodlett D, Nelson CJ, Howard PL.Cytoplasmic switch of ARS2 isoforms promotes nonsense-mediated mRNA decay and arsenic sensitivity. Nucleic Acids Res. 2022. PMID: 35104878
- Froehlich BC, Gill HK, Joshi A, Goodlett DR.MS visualization and interpretation software (MS-VIS), a tool for visualizing mass spectra and analysing mass lists. Rapid Commun Mass Spectrom. 2022. PMID: 34997654
- Harberts E, Liang T, Yoon SH, Opene BN, McFarland MA, Goodlett DR, Ernst RK.Correction to "Toll-like Receptor 4-Independent Effects of Lipopolysaccharide Identified Using Longitudinal Serum Proteomics". J Proteome Res. 2022. PMID: 34793171
- Ernst O, Khan MM, Oyler BL, Yoon SH, Sun J, Lin FY, Manes NP, MacKerell AD Jr, Fraser IDC, Ernst RK, Goodlett DR, Nita-Lazar A.Species-Specific Endotoxin Stimulus Determines Toll-Like Receptor 4- and Caspase 11-Mediated Pathway Activation Characteristics. mSystems. 2021. PMID: 34342534
- Pirog A, Faktor J, Urban-Wojciuk Z, Kote S, Chruściel E, Arcimowicz Ł, Marek-Trzonkowska N, Vojtesek B, Hupp TR, Al Shboul S, Brennan PM, Smoleński RT, Goodlett DR, Dapic I.Comparison of different digestion methods for proteomic analysis of isolated cells and FFPE tissue samples. Talanta. 2021. PMID: 34215064
- Chattagul S, Khan MM, Scott AJ, Nita-Lazar A, Ernst RK, Goodlett DR, Sermswan RW.Transcriptomics Analysis Uncovers Transient Ceftazidime Tolerance in Burkholderia Biofilms. ACS Infect Dis. 2021. PMID: 34138549
- Alfaro JA, Bohländer P, Dai M, Filius M, Howard CJ, van Kooten XF, Ohayon S, Pomorski A, Schmid S, Aksimentiev A, Anslyn EV, Bedran G, Cao C, Chinappi M, Coyaud E, Dekker C, Dittmar G, Drachman N, Eelkema R, Goodlett D, Hentz S, Kalathiya U, Kelleher NL, Kelly RT, Kelman Z, Kim SH, Kuster B, Rodriguez-Larrea D, Lindsay S, Maglia G, Marcotte EM, Marino JP, Masselon C, Mayer M, Samaras P, Sarthak K, Sepiashvili L, Stein D, Wanunu M, Wilhelm M, Yin P, Meller A, Joo C.The emerging landscape of single-molecule protein sequencing technologies. Nat Methods. 2021. PMID: 34099939
- Kalathiya U, Padariya M, Faktor J, Coyaud E, Alfaro JA, Fahraeus R, Hupp TR, Goodlett DR.Interfaces with Structure Dynamics of the Workhorses from Cells Revealed through Cross-Linking Mass Spectrometry (CLMS). Biomolecules. 2021. PMID: 33806612
- Gauthier AE, Chandler CE, Poli V, Gardner FM, Tekiau A, Smith R, Bonham KS, Cordes EE, Shank TM, Zanoni I, Goodlett DR, Biller SJ, Ernst RK, Rotjan RD, Kagan JC.Deep-sea microbes as tools to refine the rules of innate immune pattern recognition. Sci Immunol. 2021. PMID: 33712473
- Bhowmick P, Roome S, Borchers CH, Goodlett DR, Mohammed Y.An Update on MRMAssayDB: A Comprehensive Resource for Targeted Proteomics Assays in the Community. J Proteome Res. 2021. PMID: 33683131
- Weke K, Singh A, Uwugiaren N, Alfaro JA, Wang T, Hupp TR, O'Neill JR, Vojtesek B, Goodlett DR, Williams SM, Zhou M, Kelly RT, Zhu Y, Dapic I.MicroPOTS Analysis of Barrett's Esophageal Cell Line Models Identifies Proteomic Changes after Physiologic and Radiation Stress. J Proteome Res. 2021. PMID: 33491460
- Bansal R, Khan MM, Dasari S, Verma I, Goodlett DR, Manes NP, Nita-Lazar A, Sharma SP, Kumar A, Singh N, Chakraborti A, Gupta V, Dogra MR, Ram J, Gupta A.Proteomic profile of vitreous in patients with tubercular uveitis. Tuberculosis (Edinb). 2021. PMID: 33359883
- Sorensen M, Chandler CE, Gardner FM, Ramadan S, Khot PD, Leung LM, Farrance CE, Goodlett DR, Ernst RK, Nilsson E.Rapid microbial identification and colistin resistance detection via MALDI-TOF MS using a novel on-target extraction of membrane lipids. Sci Rep. 2020. PMID: 33299017
- Yang H, Jackson SN, Woods AS, Goodlett DR, Ernst RK, Scott AJ.Streamlined Analysis of Cardiolipins in Prokaryotic and Eukaryotic Samples Using a Norharmane Matrix by MALDI-MSI. J Am Soc Mass Spectrom. 2020. PMID: 32924474